Salmonella Shigella (SS) Agar- Composition, Principle, Preparation, Results, Uses

Salmonella Shigella (SS) Agar is a moderately selective and differential medium for the isolation, cultivation, and differentiation of Salmonella spp. and some strains of Shigella spp. SS Agar is a modification of the Deoxycholate Citrate Agar. It is recommended for testing clinical specimens and food testing for the presence of Salmonella spp. and some Shigella spp. SS Agar is a moderately selective medium in which gram-positive bacteria are inhibited by bile salts, brilliant green, and sodium citrate. Salmonella Shigella (SS) Agar is highly selective for Salmonella species but is inhibitory to some strains of Shigella.  It was developed to aid in the differentiation of lactose and non-lactose-fermenters from clinical specimens, suspected foods, and other such samples.

Composition of Salmonella Shigella (SS) Agar

Ingredients Gms/liter
Lactose10.0
Bile salts no.38.5
Sodium citrate8.5
Sodium thiosulfate8.5
Beef extract5.0
Proteose peptone5.0
Ferric Citrate1.0
Brilliant green0.00033
Neutral red0.025
Agar13.5

Final pH 7.0 +/- 0.2 at 25ºC.

Principle of Salmonella Shigella (SS) Agar

Salmonella Shigella agar comprises bile salts, sodium citrate, brilliant green, an enzymatic digest of casein, beef extract, an enzymatic digest of animal tissue, thiosulphate, ferric citrate, neutral red, and agar. The inclusion of Bile Salts, Sodium Citrate, and Brilliant Green serve to inhibit gram-positive, coliform organisms and inhibit swarming Proteus spp. while allowing Salmonella spp. to grow. Beef Extract, Enzymatic Digest of Casein, and Enzymatic Digest of Animal Tissue provide sources of nitrogen, carbon, and vitamins required for organism growth. Lactose serves as a carbohydrate source in Salmonella Shigella Agar. Differentiation of enteric organisms is achieved by the incorporation of lactose in the medium. Organisms that ferment lactose produce acid which, in the presence of the neutral red indicator, results in the formation of red/pink colonies. Lactose non-fermenters form colorless colonies. Sodium thiosulfate and Ferric Citrate permit detection of hydrogen sulfide by the production of colonies with black centers. Neutral red turns red in the presence of an acidic pH, thus showing fermentation has occurred.

Preparation of Salmonella Shigella (SS) Agar

  1. Suspend 60 g of the medium in one liter of deionized or distilled water.
  2. Mix well.
  3. Heat with frequent agitation and boil for one minute.
  4. Do not autoclave the media.
  5. Pour into plates.
  6. Let the agar solidify and store in the refrigerator (avoid freezing).  Prepared culture media can be kept for at least a week in refrigeration.

Result Interpretation on Salmonella Shigella (SS) Agar

Result Interpretation of SS Agar
OrganismsResult
ShigellaClear, colorless, transparent
Escherichia coliSmall, pink to red
Enterobacter, KlebsiellaLarger than E.coli, mucoid, pale, opaque cream to pink
SalmonellaColorless, transparent, with a black center if H2S is produced
Proteus Colorless, with a black center

Uses of SS Agar

  1. It is used as a selective and differential medium for the isolation of Salmonella and some Shigella species from clinical and non-clinical specimens.
  2. This medium is not recommended for the primary isolation of Shigella.
  3. It was also developed to aid in the differentiation of lactose and non-lactose-fermenters from clinical specimens, suspected foods, and other such samples.

Limitations of SS Agar

  1. The incorporation of brilliant green into this medium makes it highly selective, and has been shown to inhibit the growth of some Shigella.
  2. The bile salts may crystallize over time. They appear as small spider-like puff balls within the medium and do not affect the performance of the medium.
  3. Some strains of Shigella, such as  Shigella sonnei and S. dysenteriae serovar 1, may ferment lactose relatively slowly, and colonies change to lactose-fermenting after cultivation for 2 or more days.
  4. A few non-pathogenic organisms may grow on Salmonella Shigella agar.
  5. It is recommended that biochemical, immunological, molecular, or mass spectrometry testing be performed on colonies from pure culture for complete identification.

About Author

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Sagar Aryal, PhD

Dr. Sagar Aryal is a microbiologist, researcher, and science communicator from Nepal. He is also co-founder and Research Head of the Department of Natural Products at the Kathmandu Research Institute for Biological Sciences (KRIBS), where he leads research on natural product discovery and microbial biodiversity. Dr. Aryal earned his Ph.D. in Microbiology from Tribhuvan University, Kathmandu, Nepal, in 2025, supported by a DAAD Research Grant and a University Grants Commission (UGC) Nepal Ph.D. Fellowship. His research interests include Actinomycetes, Myxobacteria, microbial taxonomy, and natural products, particularly the discovery of bioactive compounds with potential pharmaceutical applications. He isolated and identified Nocardia nepalensis, a novel bacterial species from Nepal, contributing to understanding microbial diversity in the region. Dr. Aryal has published more than 16 research articles in international journals and contributed three book chapters to established academic publications. He has presented scientific research findings and developed international research collaborations through visits to more than 18 countries across Asia, Europe, North America, and Oceania. From 2023 to 2025, he served as the American Society for Microbiology (ASM) Young Ambassador to Nepal. Since December 2025, he has served as an Editorial Board Member of Scientific Reports, a Nature Portfolio journal. In recognition of his scientific contributions, Dr. Aryal received the NAST Science and Technology Youth Award 2025 from the Nepal Academy of Science and Technology. He previously received the Frs. Locke and Stiller Research Award (LSRA) for the 2017-2018 cycle from St. Xavier's College, Kathmandu, and a Nepal Academy of Science and Technology (NAST) Research Grant for 2017-2018. Alongside his scientific career, Dr. Aryal has more than 15 years of experience in blogging, content writing, and search engine optimization (SEO).